1 changed files with 6 additions and 0 deletions
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workflow.wdl
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| File tumor_bam_bai | File tumor_bam_bai | ||||
| File? normal_bam | File? normal_bam | ||||
| File? normal_bam_bai | File? normal_bam_bai | ||||
| File? inputBams | |||||
| File? inputBamIndexs | |||||
| Array[File]? normal_bams = read_tsv(inputBams) | |||||
| Array[File]? normal_bam_indexs = read_tsv(inputBamIndexs) | |||||
| String docker_cnvkit | String docker_cnvkit | ||||
| String cluster_config | String cluster_config | ||||
| String disk_size | String disk_size | ||||
| tumor_bam_index=tumor_bam_bai, | tumor_bam_index=tumor_bam_bai, | ||||
| normal_bam=normal_bam, | normal_bam=normal_bam, | ||||
| normal_bam_index=normal_bam_bai, | normal_bam_index=normal_bam_bai, | ||||
| normal_bams = normal_bams, | |||||
| normal_bam_indexs = normal_bam_indexs, | |||||
| docker=docker_cnvkit, | docker=docker_cnvkit, | ||||
| cluster_config=cluster_config, | cluster_config=cluster_config, | ||||
| disk_size=disk_size | disk_size=disk_size |
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