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workflow.wdl
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| String docker_annotsv | String docker_annotsv | ||||
| String docker_sequenza | String docker_sequenza | ||||
| if (defined(inputBams)) { | if (defined(inputBams)) { | ||||
| call cnvkit_multi.cnvkit_multi as cnvkit_multi{ | |||||
| call cnvkit_multi.cnvkit_multi as cnvkit{ | |||||
| input: | input: | ||||
| sample_id=sample_id, | sample_id=sample_id, | ||||
| ref_dir=ref_fasta_cnvkit, | ref_dir=ref_fasta_cnvkit, |
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