bed_file=bed_file, | bed_file=bed_file, | ||||
tumor_bam=tumor_bam, | tumor_bam=tumor_bam, | ||||
tumor_bam_index=tumor_bam_bai, | tumor_bam_index=tumor_bam_bai, | ||||
normal_bams = inputBams, | |||||
normal_bam_indexs = inputBamIndexs, | |||||
normal_bams=inputBams, | |||||
normal_bam_indexs=inputBamIndexs, | |||||
docker=docker_cnvkit, | docker=docker_cnvkit, | ||||
cluster_config=cluster_config, | cluster_config=cluster_config, | ||||
disk_size=disk_size | disk_size=disk_size |