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tasks/CNVkit.wdl
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| fi | fi | ||||
| #WGS | #WGS | ||||
| else: | |||||
| else | |||||
| if [ ${normal_bam} ]; then | if [ ${normal_bam} ]; then | ||||
| /root/miniconda2/bin/cnvkit.py batch ${tumor_bam} \ | /root/miniconda2/bin/cnvkit.py batch ${tumor_bam} \ |
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