1 changed files with 2 additions and 2 deletions
+ 2
- 2
tasks/CNVkit.wdl
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| @@ -12,7 +12,7 @@ task cnvkit{ | |||
| String cluster_config | |||
| String disk_size | |||
| command << | |||
| command <<< | |||
| set -o pipefail | |||
| set -e | |||
| @@ -40,7 +40,7 @@ task cnvkit{ | |||
| tar cvf ${sample}.tar ./ | |||
| >> | |||
| >>> | |||
| runtime{ | |||
| docker:docker | |||
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