更新 'workflow.wdl'

workflow.wdl

@@ -8,6 +8,7 @@ workflow {{ project_name }} {
     File ref_fasta_cnvkit
     String ref_fasta
     File ref_flat
+    File bed_file
     File gc
     File tumor_bam
     File tumor_bam_bai
@@ -43,6 +44,7 @@ workflow {{ project_name }} {
             fasta=ref_fasta,
             ref_flat=ref_flat,
             #hrd=HRD.hrd,
+            bed_file=bed_file,
             tumor_bam=tumor_bam,
             tumor_bam_index=tumor_bam_bai,
             normal_bam=normal_bam,