更新 'tasks/CNVkit.wdl' · 1795325153 - Choppy for Reproducible Omics Pipeline

更新 'tasks/CNVkit.wdl'

master

meng 2 years ago

parent

489e928bd2

commit

1795325153

1 changed files with 2 additions and 3 deletions

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tasks/CNVkit.wdlView File
								
															task cnvkit{
															
															task cnvkit{
														
															    String sample
															
															    String sample_id
														
															    File ref_dir
															
															    File ref_dir
														
															    String? fasta
															
															    String? fasta
														
															    File ref_flat
															
															    File ref_flat
														
															    String docker
															
															    String docker
														
															    String cluster_config
															
															    String cluster_config
														
															    String disk_size
															
															    String disk_size
														
																sample=basename(sample,".bam")
															
															    sample=basename(sample_id,".bam")
														
															    command <<<
															
															    command <<<