1 changed files with 2 additions and 0 deletions
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workflow.wdl
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| @@ -9,6 +9,7 @@ workflow {{ project_name }} { | |||
| String ref_fasta | |||
| File ref_flat | |||
| File bed_file | |||
| String center_at | |||
| File gc | |||
| File tumor_bam | |||
| File tumor_bam_bai | |||
| @@ -43,6 +44,7 @@ workflow {{ project_name }} { | |||
| ref_dir=ref_fasta_cnvkit, | |||
| fasta=ref_fasta, | |||
| ref_flat=ref_flat, | |||
| center_at=center_at, | |||
| #hrd=HRD.hrd, | |||
| bed_file=bed_file, | |||
| tumor_bam=tumor_bam, | |||
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