first commit

workflow.wdl

@@ -2,8 +2,7 @@ import "./tasks/fastp.wdl" as fastp
 import "./tasks/fastqc.wdl" as fastqc
 
 workflow {{ project_name }} {
-	File read1
-	File read2
+	File read
 	File idx
 	File screen_ref_dir
 	File fastq_screen_conf