first commit

inputs

@@ -63,5 +63,6 @@
 	"{{ project_name }}.disk_size": "{{ disk_size if disk_size != '' else 200}}",
 	"{{ project_name }}.count_docker": "{{ count_docker }}",
 	"{{ project_name }}.count_cluster": "{{ count_cluster }}",
-	"{{ project_name }}.count_length": "{{ count_length }}"
+	"{{ project_name }}.count_length": "{{ count_length }}",
+	"{{ project_name }}.length_limit": "{{ length_limit }}"
 }

workflow.wdl

@@ -86,7 +86,8 @@ workflow {{ project_name }} {
 		UMI = UMI,
 		qualified_quality_phred = qualified_quality_phred,
 		length_required1 = length_required1,
-		disable_quality_filtering = disable_quality_filtering
+		disable_quality_filtering = disable_quality_filtering,
+		length_limit = length_limit
 		}
 
 	call fastqc.fastqc as fastqc {