"fasta": "GRCh38.d1.vd1.fa", | "fasta": "GRCh38.d1.vd1.fa", | ||||
"pen_cansplice":"0", | "pen_cansplice":"0", | ||||
"pen_noncansplice":"3", | "pen_noncansplice":"3", | ||||
"pen_intronlen":"G,-8,1", | |||||
"pen_intronlen":"1", | |||||
"min_intronlen":"30", | "min_intronlen":"30", | ||||
"max_intronlen":"500000", | "max_intronlen":"500000", | ||||
"maxins":"500", | "maxins":"500", |
String stringtie_cluster | String stringtie_cluster | ||||
String multiqc_cluster_config | String multiqc_cluster_config | ||||
String multiqc_docker | String multiqc_docker | ||||
String multiqc_disk_size | |||||
Int multiqc_disk_size | |||||
Int trim_front1 | Int trim_front1 | ||||
Int trim_tail1 | Int trim_tail1 | ||||
Int max_len1 | Int max_len1 |