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tasks/reference_dict.wdl
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| set -e | set -e | ||||
| java -jar /usr/picard/picard.jar CreateSequenceDictionary \ | java -jar /usr/picard/picard.jar CreateSequenceDictionary \ | ||||
| R=${ref_dir}/${fasta} \ | R=${ref_dir}/${fasta} \ | ||||
| O=GRCh38.d1.vd1.txt | |||||
| O=GRCh38.d1.vd1.dict | |||||
| >>> | >>> | ||||
| runtime { | runtime { | ||||
| } | } | ||||
| output { | output { | ||||
| File reference_bed_dict= "GRCh38.d1.vd1.txt" | |||||
| File reference_bed_dict= "GRCh38.d1.vd1.dict" | |||||
| } | } | ||||
| } | } |
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