WGBS_pipeline/inputs

{
  "{{ project_name }}.ref_dir": "oss://choppy-app-example-data/WGBS/hg38/",
  "{{ project_name }}.fastq_1": "{{ read1 }}",
  "{{ project_name }}.cluster_config": "{{ cluster if cluster != '' else 'OnDemand ecs.sn1ne.8xlarge img-ubuntu-vpc' }}",
  "{{ project_name }}.docker": "registry-vpc.cn-shanghai.aliyuncs.com/pgx-docker-registry/bismark:1.1.0_20190225",
  "{{ project_name }}.sample": "{{ sample_name }}",
  "{{ project_name }}.disk_size": "{{ disk_size }}", 
  "{{ project_name }}.fastq_2": "{{ read2 }}",
  "{{ project_name }}.chrom_sizes_dir": "oss://choppy-app-example-data/WGBS/chrom_sizes/",
  "{{ project_name }}.chrom_sizes": "hg38.chrom.sizes"
  
}