修改错误脚本

tasks/Call_meth.wdl

@@ -1,4 +1,4 @@
-task Haplotyper {
+task Call_meth {
 	
     File ref_dir
     

tasks/Mapping.wdl

@@ -1,4 +1,4 @@
-task mapping {
+task Mapping {
 
     File ref_dir
 	File trim_read1

tasks/Trim.wdl

@@ -1,4 +1,4 @@
-task TNseq {
+task Trim {
 	
 	File fastq_1
 	File fastq_2

workflow.wdl

@@ -34,15 +34,15 @@ workflow {{ project_name }} {
 		input: 
 		sample=sample,
 		ref_dir=ref_dir,
-		trim_read1=trim_read1,
-		trim_read2=trim_read2,
+		trim_read1=Trim.trim_read1,
+		trim_read2=Trim.trim_read2,
 		docker=docker,
 		disk_size=disk_size,
 		cluster_config=cluster_config
 	}
 	call Dedup.Dedup as Dedup {
 		input:
-		unsorted_bam=mapping_R1_val_1_bismark_bt2_pe.bam,
+		unsorted_bam=Mapping.unsorted_bam,
 		sample=sample,
 		docker=docker,
 		disk_size=disk_size,
@@ -51,7 +51,7 @@ workflow {{ project_name }} {
 	call Call_meth.Call_meth as Call_meth {
 		input:
 		ref_dir=ref_dir,
-		Dedup_bam=Dedup_R1_val_1_bismark_bt2_pe.deduplicated.bam,
+		Dedup_bam=Dedup.Dedup_bam,
 		sample=sample,
 		docker=docker,
 		disk_size=disk_size,