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tasks/ballgown.wdl
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| @@ -6,7 +6,7 @@ task ballgown { | |||
| String cluster | |||
| command <<< | |||
| mkdir /cromwell_root/tmp/ballgown | |||
| mkdir -p /cromwell_root/tmp/ballgown | |||
| cp -r ${sep=" " ballgown} /cromwell_root/tmp/ballgown | |||
| Rscript /usr/bin/ballgown.R /cromwell_root/tmp/ballgown/${base} ${base}.txt | |||
| >>> | |||
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