mixcr/workflow.wdl

import "./tasks/align.wdl" as align

workflow {{ project_name }} {

	File read1
	File read2
	String docker
	String sample
  	String cluster_config
  	String disk_size
	
	
	call align.align as align {
		input: 
		read1=read1, 
		read2=read2,
		String sample,
		docker=docker,
		disk_size=disk_size,
		cluster_config=cluster_config
	}
        	
}