1 changed files with 2 additions and 2 deletions
+ 2
- 2
tasks/arcashla.wdl
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| } | } | ||||
| output { | output { | ||||
| File extracted_1p = "${base}/${base}.sorted.extracted.1.fq.gz" | |||||
| File extracted_2p = "${base}/${base}.sorted.extracted.2.fq.gz" | |||||
| File extracted_1p = "${base}/${base}.extracted.1.fq.gz" | |||||
| File extracted_2p = "${base}/${base}.extracted.2.fq.gz" | |||||
| Array[File] hla_type = ["hla_type/${base}.genotype.json", "hla_type/${base}.genes.json", "hla_type/${base}.genotype.log"] | Array[File] hla_type = ["hla_type/${base}.genotype.json", "hla_type/${base}.genes.json", "hla_type/${base}.genotype.log"] | ||||
| } | } | ||||
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