add-cluster

tasks/trimmomatic.wdl

@@ -18,7 +18,7 @@ task trimmomatic {
 	}
 
 	output {
-		File read_1p = baseout + "_1P.fq.gz"
-		File read_2p = baseout + "_2P.fq.gz"
+		File read_1p = "${baseout}/{baseout}_1P.fq.gz"
+		File read_2p = "${baseout}/{baseout}_2P.fq.gz"
 	}
 }