1 zmienionych plików z 2 dodań i 2 usunięć
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- 2
tasks/tophat2.wdl
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| String cluster | String cluster | ||||
| command <<< | command <<< | ||||
| tophat -p 8 -G ${gtf} -o baseout ${genome_directory}/${idx_prefix} ${read1} ${read2} | |||||
| tophat2 -p 8 -G ${gtf} -o ${baseout} ${genome_directory}/${idx_prefix} ${read1} ${read2} | |||||
| >>> | >>> | ||||
| runtime { | |||||
| runtime { | |||||
| docker: docker | docker: docker | ||||
| cluster: cluster | cluster: cluster | ||||
| systemDisk: "cloud_ssd 40" | systemDisk: "cloud_ssd 40" |
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