revise-reference

defaults

@@ -1,6 +1,6 @@
 {
-  "gtf": "oss://pgx-reference-data/reference/annotation/Homo_sapiens.GRCh38.93.gtf",
-  "genome_directory":"oss://pgx-reference-data/reference/tophat2",
+  "gtf": "oss://pgx-reference-data/reference/tophat2/annotation/gencode.v22.annotation.gtf",
+  "genome_directory":"oss://pgx-reference-data/reference/tophat2/genome",
   "idx_prefix":"tophat2",
   "adapter": "oss://pgx-reference-data/reference/illumina_adapter/TruSeq3-PE.fa",
   "fastqc_docker": "registry.cn-shanghai.aliyuncs.com/pgx-docker-registry/fastqc:v0.11.5",