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tasks/tophat2.wdl
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| @@ -9,7 +9,7 @@ task tophat2 { | |||
| String cluster | |||
| command <<< | |||
| tophat2 -p 6 -G ${gtf} --library-type fr-unstranded --solexa-quals -o ${baseout} ${genome_directory}/${idx_prefix} ${read1} ${read2} | |||
| tophat -p 6 -G ${gtf} --library-type fr-unstranded --solexa-quals -o ${baseout} ${genome_directory}/${idx_prefix} ${read1} ${read2} | |||
| >>> | |||
| runtime { | |||
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