change output

tasks/qualimap.wdl

@@ -10,6 +10,7 @@ task qualimap {
 		set -e
 		nt=$(nproc)
 		/opt/qualimap/qualimap bamqc -bam ${bam} -gff ${bed} -nt $nt -outdir ./ --java-mem-size=16G
+		zip -r qualimap.zip ./
 	>>>
 
 	runtime {
@@ -20,10 +21,6 @@ task qualimap {
 	}
 
 	output {
-		File qualimap_txt = "genome_results.txt"
-		Array[File] qualimap_images = glob("images_qualimapReport/*")
-		File qualimap_html = "qualimapReport.html"
-		Array[File] qulimap_raw_data = glob("raw_data_qualimapReport/*")
-		Array[File] css = glob("css/*")
+		File qualimap = "qualimap.zip"
 	}
 }