qualimap/workflow.wdl

import "./tasks/qualimap.wdl" as qualimap

workflow {{ project_name }} {
	File bam
	File bed
	String docker
	String cluster_config
	String disk_size

	call qualimap.qualimap as qualimap {
		input:
		bam=bam,
		bed=bed,
		docker=docker,
		disk_size=disk_size,
		cluster_config=cluster_config
	}
}