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prepare junction bed and gtf with novel transcripts for PGA input

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合并fastq文件

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From fastq to lncRNA profile.

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From bam to lncRNA profile.

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Variant calling using Varscan somatic, processSomatic and somaticFilter based on BAM file.

Updated 4 years ago

Calculate the bed coverage of multiple BAM files before and after dedup

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bamdst is a lightweight tool to stat the depth coverage of target regions of bam file(s).

Updated 4 years ago