Choppy for Reproducible Omics Pipeline

QC Report for Quartet DNA-Seq.

Updated 3 years ago

QC Report for Quartet RNA-Seq

Updated 3 years ago

It is used to investigate the dependence between multiple variables at the same time and to highlight the most correlated variables in a data table.

Updated 3 years ago

For RNA-seq data, from bams to AS Information files.

Updated 3 years ago

Merge RNA-Seq expression tables and generating multiqc report.

Updated 3 years ago

Integrate the graphs across samples, to form one merged splicing graph (per gene).

Updated 3 years ago

Germline & Somatic short variant discovery (SNVs + Indels) for WGS & WES.

Updated 3 years ago