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String gtf_dir = "oss://pgx-reference-data/reference/subread/" |
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String gtf_dir = "oss://pgx-reference-data/reference/subread/" |
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String subread_docker |
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String subread_docker |
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String subread_cluster |
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String subread_cluster |
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Int strand_information = 0 |
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call fastp.fastp as fastp { |
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call fastp.fastp as fastp { |
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input: |
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input: |
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lnc_gtf_file = lnc_gtf_file, |
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lnc_gtf_file = lnc_gtf_file, |
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gtf_dir = gtf_dir, |
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gtf_dir = gtf_dir, |
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docker = subread_docker, |
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docker = subread_docker, |
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cluster = subread_cluster, |
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strand_information = strand_information |
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cluster = subread_cluster |
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} |
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} |
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} |
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} |