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tasks/featureCounts.wdl
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| @@ -8,7 +8,7 @@ task featureCounts { | |||
| command <<< | |||
| featureCounts -T 4 -t exon -g gene_id -a ${lnc_gtf_file} -s 0 -p -o ${sample_id}.genefeaturecount.txt ${bam_file} | |||
| featureCounts -T 4 -t exon -g gene_id -a ${lnc_gtf_file} -s 0 -p -O -o ${sample_id}.genefeaturecount.txt ${bam_file} | |||
| >>> | |||
| runtime { | |||
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