1 muutettua tiedostoa jossa 2 lisäystä ja 2 poistoa
+ 2
- 2
tasks/featureCounts.wdl
Näytä tiedosto
| String sample_id | String sample_id | ||||
| String docker | String docker | ||||
| String cluster | String cluster | ||||
| Int strand_information = 0 | |||||
| command <<< | command <<< | ||||
| featureCounts -T 4 -t exon -g gene_id -a $gtf_dir/$lnc_gtf_file -s $strand_information -p -o $sample_id.genefeaturecount.txt $bam_file | |||||
| featureCounts -T 4 -t exon -g gene_id -a $gtf_dir/$lnc_gtf_file -s 0 -p -o $sample_id.genefeaturecount.txt $bam_file | |||||
| >>> | >>> | ||||
| runtime { | runtime { |
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