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| sample_id | bam | bai | bed |
| CBCGA218577_normal | oss://pgx-result/liuyaqing/CBCGA/dedup/CBCGA218577_normal.sorted.deduped.bam | oss://pgx-result/liuyaqing/CBCGA/dedup/CBCGA218577_normal.sorted.deduped.bam.bai | oss://pgx-reference-data/reference/wes_bedfiles/agilent_v6/s07604514_covered_selected.bed |
| CBCGA218577_tumor | oss://pgx-result/liuyaqing/CBCGA/dedup/CBCGA218577_tumor.sorted.deduped.bam | oss://pgx-result/liuyaqing/CBCGA/dedup/CBCGA218577_tumor.sorted.deduped.bam.bai | oss://pgx-reference-data/reference/wes_bedfiles/agilent_v6/s07604514_covered_selected.bed |
| CBCGA242560_normal | oss://pgx-result/liuyaqing/CBCGA/dedup/CBCGA242560_normal.sorted.deduped.bam | oss://pgx-result/liuyaqing/CBCGA/dedup/CBCGA242560_normal.sorted.deduped.bam.bai | oss://pgx-reference-data/reference/wes_bedfiles/agilent_v6/s07604514_covered_selected.bed |
| CBCGA242560_tumor | oss://pgx-result/liuyaqing/CBCGA/dedup/CBCGA242560_tumor.sorted.deduped.bam | oss://pgx-result/liuyaqing/CBCGA/dedup/CBCGA242560_tumor.sorted.deduped.bam.bai | oss://pgx-reference-data/reference/wes_bedfiles/agilent_v6/s07604514_covered_selected.bed |
| CBCGA266398_normal | oss://pgx-result/liuyaqing/CBCGA/dedup/CBCGA266398_normal.sorted.deduped.bam | oss://pgx-result/liuyaqing/CBCGA/dedup/CBCGA266398_normal.sorted.deduped.bam.bai | oss://pgx-reference-data/reference/wes_bedfiles/agilent_v6/s07604514_covered_selected.bed |
| CBCGA266398_tumor | oss://pgx-result/liuyaqing/CBCGA/dedup/CBCGA266398_tumor.sorted.deduped.bam | oss://pgx-result/liuyaqing/CBCGA/dedup/CBCGA266398_tumor.sorted.deduped.bam.bai | oss://pgx-reference-data/reference/wes_bedfiles/agilent_v6/s07604514_covered_selected.bed |
| CBCGA266806_normal | oss://pgx-result/liuyaqing/CBCGA/dedup/CBCGA266806_normal.sorted.deduped.bam | oss://pgx-result/liuyaqing/CBCGA/dedup/CBCGA266806_normal.sorted.deduped.bam.bai | oss://pgx-reference-data/reference/wes_bedfiles/agilent_v6/s07604514_covered_selected.bed |
| CBCGA266806_tumor | oss://pgx-result/liuyaqing/CBCGA/dedup/CBCGA266806_tumor.sorted.deduped.bam | oss://pgx-result/liuyaqing/CBCGA/dedup/CBCGA266806_tumor.sorted.deduped.bam.bai | oss://pgx-reference-data/reference/wes_bedfiles/agilent_v6/s07604514_covered_selected.bed |
| CBCGA269277_normal | oss://pgx-result/liuyaqing/CBCGA/dedup/CBCGA269277_normal.sorted.deduped.bam | oss://pgx-result/liuyaqing/CBCGA/dedup/CBCGA269277_normal.sorted.deduped.bam.bai | oss://pgx-reference-data/reference/wes_bedfiles/agilent_v6/s07604514_covered_selected.bed |
| CBCGA269277_tumor | oss://pgx-result/liuyaqing/CBCGA/dedup/CBCGA269277_tumor.sorted.deduped.bam | oss://pgx-result/liuyaqing/CBCGA/dedup/CBCGA269277_tumor.sorted.deduped.bam.bai | oss://pgx-reference-data/reference/wes_bedfiles/agilent_v6/s07604514_covered_selected.bed |
| CBCGA269751_normal | oss://pgx-result/liuyaqing/CBCGA/dedup/CBCGA269751_normal.sorted.deduped.bam | oss://pgx-result/liuyaqing/CBCGA/dedup/CBCGA269751_normal.sorted.deduped.bam.bai | oss://pgx-reference-data/reference/wes_bedfiles/agilent_v6/s07604514_covered_selected.bed |
| CBCGA269751_tumor | oss://pgx-result/liuyaqing/CBCGA/dedup/CBCGA269751_tumor.sorted.deduped.bam | oss://pgx-result/liuyaqing/CBCGA/dedup/CBCGA269751_tumor.sorted.deduped.bam.bai | oss://pgx-reference-data/reference/wes_bedfiles/agilent_v6/s07604514_covered_selected.bed |
| CBCGA270297_normal | oss://pgx-result/liuyaqing/CBCGA/dedup/CBCGA270297_normal.sorted.deduped.bam | oss://pgx-result/liuyaqing/CBCGA/dedup/CBCGA270297_normal.sorted.deduped.bam.bai | oss://pgx-reference-data/reference/wes_bedfiles/agilent_v6/s07604514_covered_selected.bed |
| CBCGA270297_tumor | oss://pgx-result/liuyaqing/CBCGA/dedup/CBCGA270297_tumor.sorted.deduped.bam | oss://pgx-result/liuyaqing/CBCGA/dedup/CBCGA270297_tumor.sorted.deduped.bam.bai | oss://pgx-reference-data/reference/wes_bedfiles/agilent_v6/s07604514_covered_selected.bed |
| CBCGA273358_normal | oss://pgx-result/liuyaqing/CBCGA/dedup/CBCGA273358_normal.sorted.deduped.bam | oss://pgx-result/liuyaqing/CBCGA/dedup/CBCGA273358_normal.sorted.deduped.bam.bai | oss://pgx-reference-data/reference/wes_bedfiles/agilent_v6/s07604514_covered_selected.bed |
| CBCGA273358_tumor | oss://pgx-result/liuyaqing/CBCGA/dedup/CBCGA273358_tumor.sorted.deduped.bam | oss://pgx-result/liuyaqing/CBCGA/dedup/CBCGA273358_tumor.sorted.deduped.bam.bai | oss://pgx-reference-data/reference/wes_bedfiles/agilent_v6/s07604514_covered_selected.bed |
| CBCGA274535_normal | oss://pgx-result/liuyaqing/CBCGA/dedup/CBCGA274535_normal.sorted.deduped.bam | oss://pgx-result/liuyaqing/CBCGA/dedup/CBCGA274535_normal.sorted.deduped.bam.bai | oss://pgx-reference-data/reference/wes_bedfiles/agilent_v6/s07604514_covered_selected.bed |
| CBCGA274535_tumor | oss://pgx-result/liuyaqing/CBCGA/dedup/CBCGA274535_tumor.sorted.deduped.bam | oss://pgx-result/liuyaqing/CBCGA/dedup/CBCGA274535_tumor.sorted.deduped.bam.bai | oss://pgx-reference-data/reference/wes_bedfiles/agilent_v6/s07604514_covered_selected.bed |
| CBCGA275481_normal | oss://pgx-result/liuyaqing/CBCGA/dedup/CBCGA275481_normal.sorted.deduped.bam | oss://pgx-result/liuyaqing/CBCGA/dedup/CBCGA275481_normal.sorted.deduped.bam.bai | oss://pgx-reference-data/reference/wes_bedfiles/agilent_v6/s07604514_covered_selected.bed |
| CBCGA275481_tumor | oss://pgx-result/liuyaqing/CBCGA/dedup/CBCGA275481_tumor.sorted.deduped.bam | oss://pgx-result/liuyaqing/CBCGA/dedup/CBCGA275481_tumor.sorted.deduped.bam.bai | oss://pgx-reference-data/reference/wes_bedfiles/agilent_v6/s07604514_covered_selected.bed |
| CBCGA275548_normal | oss://pgx-result/liuyaqing/CBCGA/dedup/CBCGA275548_normal.sorted.deduped.bam | oss://pgx-result/liuyaqing/CBCGA/dedup/CBCGA275548_normal.sorted.deduped.bam.bai | oss://pgx-reference-data/reference/wes_bedfiles/agilent_v6/s07604514_covered_selected.bed |
| CBCGA275548_tumor | oss://pgx-result/liuyaqing/CBCGA/dedup/CBCGA275548_tumor.sorted.deduped.bam | oss://pgx-result/liuyaqing/CBCGA/dedup/CBCGA275548_tumor.sorted.deduped.bam.bai | oss://pgx-reference-data/reference/wes_bedfiles/agilent_v6/s07604514_covered_selected.bed |
| CBCGA276514_normal | oss://pgx-result/liuyaqing/CBCGA/dedup/CBCGA276514_normal.sorted.deduped.bam | oss://pgx-result/liuyaqing/CBCGA/dedup/CBCGA276514_normal.sorted.deduped.bam.bai | oss://pgx-reference-data/reference/wes_bedfiles/agilent_v6/s07604514_covered_selected.bed |
| CBCGA276514_tumor | oss://pgx-result/liuyaqing/CBCGA/dedup/CBCGA276514_tumor.sorted.deduped.bam | oss://pgx-result/liuyaqing/CBCGA/dedup/CBCGA276514_tumor.sorted.deduped.bam.bai | oss://pgx-reference-data/reference/wes_bedfiles/agilent_v6/s07604514_covered_selected.bed |
| CBCGA277215_normal | oss://pgx-result/liuyaqing/CBCGA/dedup/CBCGA277215_normal.sorted.deduped.bam | oss://pgx-result/liuyaqing/CBCGA/dedup/CBCGA277215_normal.sorted.deduped.bam.bai | oss://pgx-reference-data/reference/wes_bedfiles/agilent_v6/s07604514_covered_selected.bed |
| CBCGA277215_tumor | oss://pgx-result/liuyaqing/CBCGA/dedup/CBCGA277215_tumor.sorted.deduped.bam | oss://pgx-result/liuyaqing/CBCGA/dedup/CBCGA277215_tumor.sorted.deduped.bam.bai | oss://pgx-reference-data/reference/wes_bedfiles/agilent_v6/s07604514_covered_selected.bed |
| CBCGA277372_normal | oss://pgx-result/liuyaqing/CBCGA/dedup/CBCGA277372_normal.sorted.deduped.bam | oss://pgx-result/liuyaqing/CBCGA/dedup/CBCGA277372_normal.sorted.deduped.bam.bai | oss://pgx-reference-data/reference/wes_bedfiles/agilent_v6/s07604514_covered_selected.bed |
| CBCGA277372_tumor | oss://pgx-result/liuyaqing/CBCGA/dedup/CBCGA277372_tumor.sorted.deduped.bam | oss://pgx-result/liuyaqing/CBCGA/dedup/CBCGA277372_tumor.sorted.deduped.bam.bai | oss://pgx-reference-data/reference/wes_bedfiles/agilent_v6/s07604514_covered_selected.bed |
| CBCGA287737_normal | oss://pgx-result/liuyaqing/CBCGA/dedup/CBCGA287737_normal.sorted.deduped.bam | oss://pgx-result/liuyaqing/CBCGA/dedup/CBCGA287737_normal.sorted.deduped.bam.bai | oss://pgx-reference-data/reference/wes_bedfiles/agilent_v6/s07604514_covered_selected.bed |
| CBCGA287737_tumor | oss://pgx-result/liuyaqing/CBCGA/dedup/CBCGA287737_tumor.sorted.deduped.bam | oss://pgx-result/liuyaqing/CBCGA/dedup/CBCGA287737_tumor.sorted.deduped.bam.bai | oss://pgx-reference-data/reference/wes_bedfiles/agilent_v6/s07604514_covered_selected.bed |
| CBCGA288015_normal | oss://pgx-result/liuyaqing/CBCGA/dedup/CBCGA288015_normal.sorted.deduped.bam | oss://pgx-result/liuyaqing/CBCGA/dedup/CBCGA288015_normal.sorted.deduped.bam.bai | oss://pgx-reference-data/reference/wes_bedfiles/agilent_v6/s07604514_covered_selected.bed |
| CBCGA288015_tumor | oss://pgx-result/liuyaqing/CBCGA/dedup/CBCGA288015_tumor.sorted.deduped.bam | oss://pgx-result/liuyaqing/CBCGA/dedup/CBCGA288015_tumor.sorted.deduped.bam.bai | oss://pgx-reference-data/reference/wes_bedfiles/agilent_v6/s07604514_covered_selected.bed |
| CBCGA288107_normal | oss://pgx-result/liuyaqing/CBCGA/dedup/CBCGA288107_normal.sorted.deduped.bam | oss://pgx-result/liuyaqing/CBCGA/dedup/CBCGA288107_normal.sorted.deduped.bam.bai | oss://pgx-reference-data/reference/wes_bedfiles/agilent_v6/s07604514_covered_selected.bed |
| CBCGA288107_tumor | oss://pgx-result/liuyaqing/CBCGA/dedup/CBCGA288107_tumor.sorted.deduped.bam | oss://pgx-result/liuyaqing/CBCGA/dedup/CBCGA288107_tumor.sorted.deduped.bam.bai | oss://pgx-reference-data/reference/wes_bedfiles/agilent_v6/s07604514_covered_selected.bed |
| CBCGA289219_normal | oss://pgx-result/liuyaqing/CBCGA/dedup/CBCGA289219_normal.sorted.deduped.bam | oss://pgx-result/liuyaqing/CBCGA/dedup/CBCGA289219_normal.sorted.deduped.bam.bai | oss://pgx-reference-data/reference/wes_bedfiles/agilent_v6/s07604514_covered_selected.bed |
| CBCGA289219_tumor | oss://pgx-result/liuyaqing/CBCGA/dedup/CBCGA289219_tumor.sorted.deduped.bam | oss://pgx-result/liuyaqing/CBCGA/dedup/CBCGA289219_tumor.sorted.deduped.bam.bai | oss://pgx-reference-data/reference/wes_bedfiles/agilent_v6/s07604514_covered_selected.bed |
| CBCGA289858_normal | oss://pgx-result/liuyaqing/CBCGA/dedup/CBCGA289858_normal.sorted.deduped.bam | oss://pgx-result/liuyaqing/CBCGA/dedup/CBCGA289858_normal.sorted.deduped.bam.bai | oss://pgx-reference-data/reference/wes_bedfiles/agilent_v6/s07604514_covered_selected.bed |
| CBCGA289858_tumor | oss://pgx-result/liuyaqing/CBCGA/dedup/CBCGA289858_tumor.sorted.deduped.bam | oss://pgx-result/liuyaqing/CBCGA/dedup/CBCGA289858_tumor.sorted.deduped.bam.bai | oss://pgx-reference-data/reference/wes_bedfiles/agilent_v6/s07604514_covered_selected.bed |
| CBCGA302358-1_tumor | oss://pgx-result/liuyaqing/CBCGA/dedup/CBCGA302358-1_tumor.sorted.deduped.bam | oss://pgx-result/liuyaqing/CBCGA/dedup/CBCGA302358-1_tumor.sorted.deduped.bam.bai | oss://pgx-reference-data/reference/wes_bedfiles/agilent_v6/s07604514_covered_selected.bed |
| CBCGA302358-2_normal | oss://pgx-result/liuyaqing/CBCGA/dedup/CBCGA302358-2_normal.sorted.deduped.bam | oss://pgx-result/liuyaqing/CBCGA/dedup/CBCGA302358-2_normal.sorted.deduped.bam.bai | oss://pgx-reference-data/reference/wes_bedfiles/agilent_v6/s07604514_covered_selected.bed |
| CBCGA302358-2_tumor | oss://pgx-result/liuyaqing/CBCGA/dedup/CBCGA302358-2_tumor.sorted.deduped.bam | oss://pgx-result/liuyaqing/CBCGA/dedup/CBCGA302358-2_tumor.sorted.deduped.bam.bai | oss://pgx-reference-data/reference/wes_bedfiles/agilent_v6/s07604514_covered_selected.bed |
| CBCGA312324-1_normal | oss://pgx-result/liuyaqing/CBCGA/dedup/CBCGA312324-1_normal.sorted.deduped.bam | oss://pgx-result/liuyaqing/CBCGA/dedup/CBCGA312324-1_normal.sorted.deduped.bam.bai | oss://pgx-reference-data/reference/wes_bedfiles/agilent_v6/s07604514_covered_selected.bed |
| CBCGA312324-1_tumor | oss://pgx-result/liuyaqing/CBCGA/dedup/CBCGA312324-1_tumor.sorted.deduped.bam | oss://pgx-result/liuyaqing/CBCGA/dedup/CBCGA312324-1_tumor.sorted.deduped.bam.bai | oss://pgx-reference-data/reference/wes_bedfiles/agilent_v6/s07604514_covered_selected.bed |
| CBCGA312324-2_normal | oss://pgx-result/liuyaqing/CBCGA/dedup/CBCGA312324-2_normal.sorted.deduped.bam | oss://pgx-result/liuyaqing/CBCGA/dedup/CBCGA312324-2_normal.sorted.deduped.bam.bai | oss://pgx-reference-data/reference/wes_bedfiles/agilent_v6/s07604514_covered_selected.bed |
| CBCGA312324-2_tumor | oss://pgx-result/liuyaqing/CBCGA/dedup/CBCGA312324-2_tumor.sorted.deduped.bam | oss://pgx-result/liuyaqing/CBCGA/dedup/CBCGA312324-2_tumor.sorted.deduped.bam.bai | oss://pgx-reference-data/reference/wes_bedfiles/agilent_v6/s07604514_covered_selected.bed |
| CBCGA313347_normal | oss://pgx-result/liuyaqing/CBCGA/dedup/CBCGA313347_normal.sorted.deduped.bam | oss://pgx-result/liuyaqing/CBCGA/dedup/CBCGA313347_normal.sorted.deduped.bam.bai | oss://pgx-reference-data/reference/wes_bedfiles/agilent_v6/s07604514_covered_selected.bed |
| CBCGA313347_tumor | oss://pgx-result/liuyaqing/CBCGA/dedup/CBCGA313347_tumor.sorted.deduped.bam | oss://pgx-result/liuyaqing/CBCGA/dedup/CBCGA313347_tumor.sorted.deduped.bam.bai | oss://pgx-reference-data/reference/wes_bedfiles/agilent_v6/s07604514_covered_selected.bed |
| CBCGA315277_normal | oss://pgx-result/liuyaqing/CBCGA/dedup/CBCGA315277_normal.sorted.deduped.bam | oss://pgx-result/liuyaqing/CBCGA/dedup/CBCGA315277_normal.sorted.deduped.bam.bai | oss://pgx-reference-data/reference/wes_bedfiles/agilent_v6/s07604514_covered_selected.bed |
| CBCGA315277_tumor | oss://pgx-result/liuyaqing/CBCGA/dedup/CBCGA315277_tumor.sorted.deduped.bam | oss://pgx-result/liuyaqing/CBCGA/dedup/CBCGA315277_tumor.sorted.deduped.bam.bai | oss://pgx-reference-data/reference/wes_bedfiles/agilent_v6/s07604514_covered_selected.bed |
| CBCGA316225_normal | oss://pgx-result/liuyaqing/CBCGA/dedup/CBCGA316225_normal.sorted.deduped.bam | oss://pgx-result/liuyaqing/CBCGA/dedup/CBCGA316225_normal.sorted.deduped.bam.bai | oss://pgx-reference-data/reference/wes_bedfiles/agilent_v6/s07604514_covered_selected.bed |
| CBCGA316225_tumor | oss://pgx-result/liuyaqing/CBCGA/dedup/CBCGA316225_tumor.sorted.deduped.bam | oss://pgx-result/liuyaqing/CBCGA/dedup/CBCGA316225_tumor.sorted.deduped.bam.bai | oss://pgx-reference-data/reference/wes_bedfiles/agilent_v6/s07604514_covered_selected.bed |
| CBCGA316570_normal | oss://pgx-result/liuyaqing/CBCGA/dedup/CBCGA316570_normal.sorted.deduped.bam | oss://pgx-result/liuyaqing/CBCGA/dedup/CBCGA316570_normal.sorted.deduped.bam.bai | oss://pgx-reference-data/reference/wes_bedfiles/agilent_v6/s07604514_covered_selected.bed |
| CBCGA316570_tumor | oss://pgx-result/liuyaqing/CBCGA/dedup/CBCGA316570_tumor.sorted.deduped.bam | oss://pgx-result/liuyaqing/CBCGA/dedup/CBCGA316570_tumor.sorted.deduped.bam.bai | oss://pgx-reference-data/reference/wes_bedfiles/agilent_v6/s07604514_covered_selected.bed |
| CBCGA317216_normal | oss://pgx-result/liuyaqing/CBCGA/dedup/CBCGA317216_normal.sorted.deduped.bam | oss://pgx-result/liuyaqing/CBCGA/dedup/CBCGA317216_normal.sorted.deduped.bam.bai | oss://pgx-reference-data/reference/wes_bedfiles/agilent_v6/s07604514_covered_selected.bed |
| CBCGA317216_tumor | oss://pgx-result/liuyaqing/CBCGA/dedup/CBCGA317216_tumor.sorted.deduped.bam | oss://pgx-result/liuyaqing/CBCGA/dedup/CBCGA317216_tumor.sorted.deduped.bam.bai | oss://pgx-reference-data/reference/wes_bedfiles/agilent_v6/s07604514_covered_selected.bed |
| CBCGA317438_normal | oss://pgx-result/liuyaqing/CBCGA/dedup/CBCGA317438_normal.sorted.deduped.bam | oss://pgx-result/liuyaqing/CBCGA/dedup/CBCGA317438_normal.sorted.deduped.bam.bai | oss://pgx-reference-data/reference/wes_bedfiles/agilent_v6/s07604514_covered_selected.bed |
| CBCGA317438_tumor | oss://pgx-result/liuyaqing/CBCGA/dedup/CBCGA317438_tumor.sorted.deduped.bam | oss://pgx-result/liuyaqing/CBCGA/dedup/CBCGA317438_tumor.sorted.deduped.bam.bai | oss://pgx-reference-data/reference/wes_bedfiles/agilent_v6/s07604514_covered_selected.bed |
| CBCGA364064_normal | oss://pgx-result/liuyaqing/CBCGA/dedup/CBCGA364064_normal.sorted.deduped.bam | oss://pgx-result/liuyaqing/CBCGA/dedup/CBCGA364064_normal.sorted.deduped.bam.bai | oss://pgx-reference-data/reference/wes_bedfiles/agilent_v6/s07604514_covered_selected.bed |
| CBCGA364064_tumor | oss://pgx-result/liuyaqing/CBCGA/dedup/CBCGA364064_tumor.sorted.deduped.bam | oss://pgx-result/liuyaqing/CBCGA/dedup/CBCGA364064_tumor.sorted.deduped.bam.bai | oss://pgx-reference-data/reference/wes_bedfiles/agilent_v6/s07604514_covered_selected.bed |
| CBCGA364330_normal | oss://pgx-result/liuyaqing/CBCGA/dedup/CBCGA364330_normal.sorted.deduped.bam | oss://pgx-result/liuyaqing/CBCGA/dedup/CBCGA364330_normal.sorted.deduped.bam.bai | oss://pgx-reference-data/reference/wes_bedfiles/agilent_v6/s07604514_covered_selected.bed |
| CBCGA364330_tumor | oss://pgx-result/liuyaqing/CBCGA/dedup/CBCGA364330_tumor.sorted.deduped.bam | oss://pgx-result/liuyaqing/CBCGA/dedup/CBCGA364330_tumor.sorted.deduped.bam.bai | oss://pgx-reference-data/reference/wes_bedfiles/agilent_v6/s07604514_covered_selected.bed |
| CBCGA364399_normal | oss://pgx-result/liuyaqing/CBCGA/dedup/CBCGA364399_normal.sorted.deduped.bam | oss://pgx-result/liuyaqing/CBCGA/dedup/CBCGA364399_normal.sorted.deduped.bam.bai | oss://pgx-reference-data/reference/wes_bedfiles/agilent_v6/s07604514_covered_selected.bed |
| CBCGA364399_tumor | oss://pgx-result/liuyaqing/CBCGA/dedup/CBCGA364399_tumor.sorted.deduped.bam | oss://pgx-result/liuyaqing/CBCGA/dedup/CBCGA364399_tumor.sorted.deduped.bam.bai | oss://pgx-reference-data/reference/wes_bedfiles/agilent_v6/s07604514_covered_selected.bed |
| CBCGA364819_normal | oss://pgx-result/liuyaqing/CBCGA/dedup/CBCGA364819_normal.sorted.deduped.bam | oss://pgx-result/liuyaqing/CBCGA/dedup/CBCGA364819_normal.sorted.deduped.bam.bai | oss://pgx-reference-data/reference/wes_bedfiles/agilent_v6/s07604514_covered_selected.bed |
| CBCGA364819_tumor | oss://pgx-result/liuyaqing/CBCGA/dedup/CBCGA364819_tumor.sorted.deduped.bam | oss://pgx-result/liuyaqing/CBCGA/dedup/CBCGA364819_tumor.sorted.deduped.bam.bai | oss://pgx-reference-data/reference/wes_bedfiles/agilent_v6/s07604514_covered_selected.bed |
| FUSCCTNBC176_normal | oss://choppy-cromwell-result/test-choppy/WES1020_TNBC_mapping_liuyaqing/0cb355ea-c132-4d62-b885-57bdbe2d392c/call-mapping/FUSCCTNBC176_normal.sorted.bam | oss://choppy-cromwell-result/test-choppy/WES1020_TNBC_mapping_liuyaqing/0cb355ea-c132-4d62-b885-57bdbe2d392c/call-mapping/FUSCCTNBC176_normal.sorted.bam.bai | oss://pgx-reference-data/reference/wes_bedfiles/agilent_v6/s07604514_covered_selected.bed |
| FUSCCTNBC012_tumor | oss://choppy-cromwell-result/test-choppy/WES1020_TNBC_mapping_liuyaqing/17a10ccc-0a3d-4ae9-aadb-c7555cbf3a01/call-mapping/FUSCCTNBC012_tumor.sorted.bam | oss://choppy-cromwell-result/test-choppy/WES1020_TNBC_mapping_liuyaqing/17a10ccc-0a3d-4ae9-aadb-c7555cbf3a01/call-mapping/FUSCCTNBC012_tumor.sorted.bam.bai | oss://pgx-reference-data/reference/wes_bedfiles/agilent_v6/s07604514_covered_selected.bed |
| FUSCCTNBC174_normal | oss://choppy-cromwell-result/test-choppy/WES1020_TNBC_mapping_liuyaqing/1a887567-a3c3-4dc9-8d9f-2bd23fae3bbf/call-mapping/FUSCCTNBC174_normal.sorted.bam | oss://choppy-cromwell-result/test-choppy/WES1020_TNBC_mapping_liuyaqing/1a887567-a3c3-4dc9-8d9f-2bd23fae3bbf/call-mapping/FUSCCTNBC174_normal.sorted.bam.bai | oss://pgx-reference-data/reference/wes_bedfiles/agilent_v6/s07604514_covered_selected.bed |
| FUSCCTNBC422_normal | oss://choppy-cromwell-result/test-choppy/WES1020_TNBC_mapping_liuyaqing/1e934995-64e2-46ef-b2dd-bc16e2c77b8a/call-mapping/FUSCCTNBC422_normal.sorted.bam | oss://choppy-cromwell-result/test-choppy/WES1020_TNBC_mapping_liuyaqing/1e934995-64e2-46ef-b2dd-bc16e2c77b8a/call-mapping/FUSCCTNBC422_normal.sorted.bam.bai | oss://pgx-reference-data/reference/wes_bedfiles/agilent_v6/s07604514_covered_selected.bed |
| FUSCCTNBC247_normal | oss://choppy-cromwell-result/test-choppy/WES1020_TNBC_mapping_liuyaqing/22c09c14-5175-4b11-97b7-b2c8394e69f7/call-mapping/FUSCCTNBC247_normal.sorted.bam | oss://choppy-cromwell-result/test-choppy/WES1020_TNBC_mapping_liuyaqing/22c09c14-5175-4b11-97b7-b2c8394e69f7/call-mapping/FUSCCTNBC247_normal.sorted.bam.bai | oss://pgx-reference-data/reference/wes_bedfiles/agilent_v6/s07604514_covered_selected.bed |
| FUSCCTNBC255_normal | oss://choppy-cromwell-result/test-choppy/WES1020_TNBC_mapping_liuyaqing/2c6a6389-0c11-4208-a7d9-a5370a1e8b7c/call-mapping/FUSCCTNBC255_normal.sorted.bam | oss://choppy-cromwell-result/test-choppy/WES1020_TNBC_mapping_liuyaqing/2c6a6389-0c11-4208-a7d9-a5370a1e8b7c/call-mapping/FUSCCTNBC255_normal.sorted.bam.bai | oss://pgx-reference-data/reference/wes_bedfiles/agilent_v6/s07604514_covered_selected.bed |
| FUSCCTNBC422_tumor | oss://choppy-cromwell-result/test-choppy/WES1020_TNBC_mapping_liuyaqing/2f7a4608-a6bf-453c-ad6d-b1ac32154464/call-mapping/FUSCCTNBC422_tumor.sorted.bam | oss://choppy-cromwell-result/test-choppy/WES1020_TNBC_mapping_liuyaqing/2f7a4608-a6bf-453c-ad6d-b1ac32154464/call-mapping/FUSCCTNBC422_tumor.sorted.bam.bai | oss://pgx-reference-data/reference/wes_bedfiles/agilent_v6/s07604514_covered_selected.bed |
| CBCGA312324_normal | oss://choppy-cromwell-result/test-choppy/WES1020_TNBC_mapping_liuyaqing/4601aa73-f3f3-4c2c-aa58-3e6fca3b63a8/call-mapping/CBCGA312324_normal.sorted.bam | oss://choppy-cromwell-result/test-choppy/WES1020_TNBC_mapping_liuyaqing/4601aa73-f3f3-4c2c-aa58-3e6fca3b63a8/call-mapping/CBCGA312324_normal.sorted.bam.bai | oss://pgx-reference-data/reference/wes_bedfiles/agilent_v6/s07604514_covered_selected.bed |
| FUSCCTNBC012_normal | oss://choppy-cromwell-result/test-choppy/WES1020_TNBC_mapping_liuyaqing/4b687131-2951-49ed-b62e-accdc2e71c82/call-mapping/FUSCCTNBC012_normal.sorted.bam | oss://choppy-cromwell-result/test-choppy/WES1020_TNBC_mapping_liuyaqing/4b687131-2951-49ed-b62e-accdc2e71c82/call-mapping/FUSCCTNBC012_normal.sorted.bam.bai | oss://pgx-reference-data/reference/wes_bedfiles/agilent_v6/s07604514_covered_selected.bed |
| FUSCCTNBC174_tumor | oss://choppy-cromwell-result/test-choppy/WES1020_TNBC_mapping_liuyaqing/501b4b16-7990-4966-924b-65f4bf529ce1/call-mapping/FUSCCTNBC174_tumor.sorted.bam | oss://choppy-cromwell-result/test-choppy/WES1020_TNBC_mapping_liuyaqing/501b4b16-7990-4966-924b-65f4bf529ce1/call-mapping/FUSCCTNBC174_tumor.sorted.bam.bai | oss://pgx-reference-data/reference/wes_bedfiles/agilent_v6/s07604514_covered_selected.bed |
| FUSCCTNBC247_tumor | oss://choppy-cromwell-result/test-choppy/WES1020_TNBC_mapping_liuyaqing/508a6740-6d4b-4d5c-99a7-43d3af6d7d54/call-mapping/FUSCCTNBC247_tumor.sorted.bam | oss://choppy-cromwell-result/test-choppy/WES1020_TNBC_mapping_liuyaqing/508a6740-6d4b-4d5c-99a7-43d3af6d7d54/call-mapping/FUSCCTNBC247_tumor.sorted.bam.bai | oss://pgx-reference-data/reference/wes_bedfiles/agilent_v6/s07604514_covered_selected.bed |
| FUSCCTNBC430_tumor | oss://choppy-cromwell-result/test-choppy/WES1020_TNBC_mapping_liuyaqing/66cf5d4e-b0a2-4e0f-a432-de7b46f0efee/call-mapping/FUSCCTNBC430_tumor.sorted.bam | oss://choppy-cromwell-result/test-choppy/WES1020_TNBC_mapping_liuyaqing/66cf5d4e-b0a2-4e0f-a432-de7b46f0efee/call-mapping/FUSCCTNBC430_tumor.sorted.bam.bai | oss://pgx-reference-data/reference/wes_bedfiles/agilent_v6/s07604514_covered_selected.bed |
| FUSCCTNBC018_normal | oss://choppy-cromwell-result/test-choppy/WES1020_TNBC_mapping_liuyaqing/6cfc8ebc-ecdd-4566-a265-1f82638b4f76/call-mapping/FUSCCTNBC018_normal.sorted.bam | oss://choppy-cromwell-result/test-choppy/WES1020_TNBC_mapping_liuyaqing/6cfc8ebc-ecdd-4566-a265-1f82638b4f76/call-mapping/FUSCCTNBC018_normal.sorted.bam.bai | oss://pgx-reference-data/reference/wes_bedfiles/agilent_v6/s07604514_covered_selected.bed |
| FUSCCTNBC018_tumor | oss://choppy-cromwell-result/test-choppy/WES1020_TNBC_mapping_liuyaqing/9584364b-cdce-4b05-a59c-68c98ac4cb12/call-mapping/FUSCCTNBC018_tumor.sorted.bam | oss://choppy-cromwell-result/test-choppy/WES1020_TNBC_mapping_liuyaqing/9584364b-cdce-4b05-a59c-68c98ac4cb12/call-mapping/FUSCCTNBC018_tumor.sorted.bam.bai | oss://pgx-reference-data/reference/wes_bedfiles/agilent_v6/s07604514_covered_selected.bed |
| FUSCCTNBC176_tumor | oss://choppy-cromwell-result/test-choppy/WES1020_TNBC_mapping_liuyaqing/9e3e45c6-a718-4543-a2c7-88e39e0b642d/call-mapping/FUSCCTNBC176_tumor.sorted.bam | oss://choppy-cromwell-result/test-choppy/WES1020_TNBC_mapping_liuyaqing/9e3e45c6-a718-4543-a2c7-88e39e0b642d/call-mapping/FUSCCTNBC176_tumor.sorted.bam.bai | oss://pgx-reference-data/reference/wes_bedfiles/agilent_v6/s07604514_covered_selected.bed |
| CBCGA302358_normal | oss://choppy-cromwell-result/test-choppy/WES1020_TNBC_mapping_liuyaqing/a5a9c828-2b43-4a72-a7a6-c29288c75b68/call-mapping/CBCGA302358_normal.sorted.bam | oss://choppy-cromwell-result/test-choppy/WES1020_TNBC_mapping_liuyaqing/a5a9c828-2b43-4a72-a7a6-c29288c75b68/call-mapping/CBCGA302358_normal.sorted.bam.bai | oss://pgx-reference-data/reference/wes_bedfiles/agilent_v6/s07604514_covered_selected.bed |
| FUSCCTNBC255_tumor | oss://choppy-cromwell-result/test-choppy/WES1020_TNBC_mapping_liuyaqing/aa18ec64-7f7a-402e-9ac1-915e9476f66b/call-mapping/FUSCCTNBC255_tumor.sorted.bam | oss://choppy-cromwell-result/test-choppy/WES1020_TNBC_mapping_liuyaqing/aa18ec64-7f7a-402e-9ac1-915e9476f66b/call-mapping/FUSCCTNBC255_tumor.sorted.bam.bai | oss://pgx-reference-data/reference/wes_bedfiles/agilent_v6/s07604514_covered_selected.bed |
| CBCGA302358_tumor | oss://choppy-cromwell-result/test-choppy/WES1020_TNBC_mapping_liuyaqing/bc08bb9d-b2d8-44bc-abf6-d0b57b9aefa6/call-mapping/CBCGA302358_tumor.sorted.bam | oss://choppy-cromwell-result/test-choppy/WES1020_TNBC_mapping_liuyaqing/bc08bb9d-b2d8-44bc-abf6-d0b57b9aefa6/call-mapping/CBCGA302358_tumor.sorted.bam.bai | oss://pgx-reference-data/reference/wes_bedfiles/agilent_v6/s07604514_covered_selected.bed |
| FUSCCTNBC430_normal | oss://choppy-cromwell-result/test-choppy/WES1020_TNBC_mapping_liuyaqing/c0778ef4-809e-418a-aace-2953bc000be0/call-mapping/FUSCCTNBC430_normal.sorted.bam | oss://choppy-cromwell-result/test-choppy/WES1020_TNBC_mapping_liuyaqing/c0778ef4-809e-418a-aace-2953bc000be0/call-mapping/FUSCCTNBC430_normal.sorted.bam.bai | oss://pgx-reference-data/reference/wes_bedfiles/agilent_v6/s07604514_covered_selected.bed |
| FUSCCTNBC297_normal | oss://choppy-cromwell-result/test-choppy/WES1020_TNBC_mapping_liuyaqing/c51b48ee-34d1-43c2-b450-fca404cf86d2/call-mapping/FUSCCTNBC297_normal.sorted.bam | oss://choppy-cromwell-result/test-choppy/WES1020_TNBC_mapping_liuyaqing/c51b48ee-34d1-43c2-b450-fca404cf86d2/call-mapping/FUSCCTNBC297_normal.sorted.bam.bai | oss://pgx-reference-data/reference/wes_bedfiles/agilent_v6/s07604514_covered_selected.bed |
| CBCGA302358-2K_normal | oss://choppy-cromwell-result/test-choppy/WES1020_TNBC_mapping_liuyaqing/c9231d82-e93a-4b02-b334-aef75fd67fd2/call-mapping/CBCGA302358-2K_normal.sorted.bam | oss://choppy-cromwell-result/test-choppy/WES1020_TNBC_mapping_liuyaqing/c9231d82-e93a-4b02-b334-aef75fd67fd2/call-mapping/CBCGA302358-2K_normal.sorted.bam.bai | oss://pgx-reference-data/reference/wes_bedfiles/agilent_v6/s07604514_covered_selected.bed |
| CBCGA312324_tumor | oss://choppy-cromwell-result/test-choppy/WES1020_TNBC_mapping_liuyaqing/d6e73c7a-ee0f-4bfb-aec3-257ce83d20ed/call-mapping/CBCGA312324_tumor.sorted.bam | oss://choppy-cromwell-result/test-choppy/WES1020_TNBC_mapping_liuyaqing/d6e73c7a-ee0f-4bfb-aec3-257ce83d20ed/call-mapping/CBCGA312324_tumor.sorted.bam.bai | oss://pgx-reference-data/reference/wes_bedfiles/agilent_v6/s07604514_covered_selected.bed |
| CBCGA302358-M220_normal | oss://choppy-cromwell-result/test-choppy/WES1020_TNBC_mapping_liuyaqing/dd0aa5dd-8076-4f64-9790-a10234091424/call-mapping/CBCGA302358-M220_normal.sorted.bam | oss://choppy-cromwell-result/test-choppy/WES1020_TNBC_mapping_liuyaqing/dd0aa5dd-8076-4f64-9790-a10234091424/call-mapping/CBCGA302358-M220_normal.sorted.bam.bai | oss://pgx-reference-data/reference/wes_bedfiles/agilent_v6/s07604514_covered_selected.bed |
| FUSCCTNBC297_tumor | oss://choppy-cromwell-result/test-choppy/WES1020_TNBC_mapping_liuyaqing/df56fa2d-daae-4c00-ba46-37af02d9cd7d/call-mapping/FUSCCTNBC297_tumor.sorted.bam | oss://choppy-cromwell-result/test-choppy/WES1020_TNBC_mapping_liuyaqing/df56fa2d-daae-4c00-ba46-37af02d9cd7d/call-mapping/FUSCCTNBC297_tumor.sorted.bam.bai | oss://pgx-reference-data/reference/wes_bedfiles/agilent_v6/s07604514_covered_selected.bed |
| CBCGA312324-2K_tumor | oss://choppy-cromwell-result/test-choppy/WES1020_TNBC_mapping_liuyaqing/e6fd091d-30d2-4697-8fb4-a9b9ec3987cb/call-mapping/CBCGA312324-2K_tumor.sorted.bam | oss://choppy-cromwell-result/test-choppy/WES1020_TNBC_mapping_liuyaqing/e6fd091d-30d2-4697-8fb4-a9b9ec3987cb/call-mapping/CBCGA312324-2K_tumor.sorted.bam.bai | oss://pgx-reference-data/reference/wes_bedfiles/agilent_v6/s07604514_covered_selected.bed |