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workflow.wdl
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| import "./tasks/BAMReadCount.wdl" as BAMReadCount | import "./tasks/BAMReadCount.wdl" as BAMReadCount | ||||
| workflow {{ project_name }} { | workflow {{ project_name }} { | ||||
| File ref_dir | |||||
| File fa | File fa | ||||
| File fai | File fai | ||||
| File bed | File bed | ||||
| call BAMReadCount.BAMReadCount as BAMReadCount { | call BAMReadCount.BAMReadCount as BAMReadCount { | ||||
| input: | input: | ||||
| ref_dir = ref_dir, | |||||
| fa = fa, | fa = fa, | ||||
| fai = fai, | fai = fai, | ||||
| bed = bed, | bed = bed, |
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