更新 'workflow.wdl'

workflow.wdl

@@ -1,4 +1,4 @@
-import "./tasks/samtools.wdl" as samtools
+import "./tasks/samtools_index.wdl" as samtools_index
 import "./tasks/spladder.wdl" as spladder
 
 
@@ -14,13 +14,14 @@ workflow {{ project_name }} {
     String samtools_cluster
     String disk_size	
 
-	call samtools.samtools as samtools {
+	call samtools_index.samtools_index as samtools_index {
 		input:
-		docker = samtools_docker,
-		cluster = samtools_cluster,
-		bam_file = bam_file,
-		disk_size = disk_size
-  }
+		bam=bam,
+		docker=samtools_docker,
+		cluster_config=cluster_config,
+		disk_size=disk_size
+	}
+}
 
 	call spladder.spladder as spladder {
 		input: