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tasks/spladder_quantification.wdl
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| File alignment_bai = "alignment_bai.txt" | File alignment_bai = "alignment_bai.txt" | ||||
| File pickle_txt = "pickle.txt" | File pickle_txt = "pickle.txt" | ||||
| File count_hdf5_txt = "count_hdf5.txt" | File count_hdf5_txt = "count_hdf5.txt" | ||||
| Array[File] AS_gff = glob("${sample_id}/spladder_out/*.gff3") | |||||
| Array[File] AS_gz = glob("${sample_id}/spladder_out/*.gz") | |||||
| Array[File] spladder_out = glob("${sample_id}/spladder_out/*") | |||||
| Array[File] spladder = glob("${sample_id}/spladder_out/spladder/*") | Array[File] spladder = glob("${sample_id}/spladder_out/spladder/*") | ||||
| } | } | ||||
| } | } |
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