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@@ -8,15 +8,45 @@ |
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> |
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> Last Updates: 2021/11/15 |
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## 安装指南 |
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## Requirements |
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- choppy |
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- Ali-Cloud |
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- Linux |
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``` |
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# 激活choppy环境 |
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source activate choppy |
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# 安装app |
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choppy install chenqingwang/RNAseq-qc-directional |
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$ source activate choppy (open-choppy-env) |
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# 第一次安装 |
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$ choppy install chenqingwang/RNAseq-qc-directional |
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# 非第一次安装 |
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$ choppy install chenqingwang/RNAseq-qc-directional -f |
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# 查询已安装APP |
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$ choppy apps |
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``` |
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## Quick Start |
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``` |
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# 准备 samples.csv 文件 |
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$ choppy samples chenqingwang/RNAseq-qc-directional-latest > samples.csv |
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# 准备无默认参数的samples.csv 文件 |
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$ choppy samples --no-default chenqingwang/RNAseq-qc-directional-latest> samples.csv |
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# 提交任务 |
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$ choppy batch chenqingwang/RNAseq-qc-directional-latest samples.csv -p Your_project_name -l Your_label |
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# 查询任务运行状况 |
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$ choppy query -L Your_label | grep "status" |
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# 查询失败任务 |
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$ choppy search -s Failed -p Your_project_name -u chenqingwang --short-format |
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# 结果文件地址 |
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$ oss://choppy-cromwell-result/test-choppy/Your_project_name/ |
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## App概述 |
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