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modify sentieon

tags/v0.2.0
Haonan917 2 年前
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2c2b0cf86e
共有 2 个文件被更改,包括 0 次插入2 次删除
  1. +0
    -1
      inputs
  2. +0
    -1
      tasks/sentieon.wdl

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- 1
inputs 查看文件

"{{ project_name }}.fastq_2_D5": "{{ fastq_2_D5 }}", "{{ project_name }}.fastq_2_D5": "{{ fastq_2_D5 }}",
"{{ project_name }}.FASTQSCREENdocker": "{{ FASTQSCREENdocker }}", "{{ project_name }}.FASTQSCREENdocker": "{{ FASTQSCREENdocker }}",
"{{ project_name }}.fastq_2_F7": "{{ fastq_2_F7 }}", "{{ project_name }}.fastq_2_F7": "{{ fastq_2_F7 }}",
"{{ project_name }}.SENTIEON_LICENSE": "{{ SENTIEON_LICENSE }}",
"{{ project_name }}.fastq_1_D6": "{{ fastq_1_D6 }}", "{{ project_name }}.fastq_1_D6": "{{ fastq_1_D6 }}",
"{{ project_name }}.fastq_1_F7": "{{ fastq_1_F7 }}", "{{ project_name }}.fastq_1_F7": "{{ fastq_1_F7 }}",
"{{ project_name }}.REPLACE_SENTIEON_DOCKER": "{{ REPLACE_SENTIEON_DOCKER }}", "{{ project_name }}.REPLACE_SENTIEON_DOCKER": "{{ REPLACE_SENTIEON_DOCKER }}",

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tasks/sentieon.wdl 查看文件

File hs_metrics File hs_metrics


String sample = basename(quality_yield,"_deduped_QualityYield.txt") String sample = basename(quality_yield,"_deduped_QualityYield.txt")
String docker
String cluster_config String cluster_config
String disk_size String disk_size



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