7 commit

tasks/fusioncatcher.wdl

@@ -24,7 +24,7 @@ task fusioncatcher{
     >>>
 	
     runtime {
-    docker :  docker
+    docker : docker
     cluster: cluster
     systemDisk: "cloud_ssd 40"
     dataDisk: "cloud_ssd " + disk_size + " /cromwell_root/"

workflow.wdl

@@ -11,12 +11,12 @@ workflow {{ project_name }} {
 
 	    call fusioncatcher.fusioncatcher as fusioncatcher {
 	            input:	
-	            sample_id = sample_id,
-	            sample_fastq_dir = sample_fastq_dir,
-	            database_dir = fusioncatcher_database_dir,
-	            docker = fusioncatcher_docker,
-	            cluster = fusioncatcher_cluster,
-	            disk_size = disk_size
+	            sample_id=sample_id,
+	            sample_fastq_dir=sample_fastq_dir,
+	            database_dir=fusioncatcher_database_dir,
+	            docker=fusioncatcher_docker,
+	            cluster=fusioncatcher_cluster,
+	            disk_size=disk_size
 
 	    }