1 changed files with 4 additions and 2 deletions
+ 4
- 2
workflow.wdl
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| workflow {{ project_name }} { | workflow {{ project_name }} { | ||||
| String sample_id | String sample_id | ||||
| File sample_fastq_dir | |||||
| File fastq1 | |||||
| File fastq2 | |||||
| File fusioncatcher_database_dir | File fusioncatcher_database_dir | ||||
| String fusioncatcher_docker | String fusioncatcher_docker | ||||
| call fusioncatcher.fusioncatcher as fusioncatcher { | call fusioncatcher.fusioncatcher as fusioncatcher { | ||||
| input: | input: | ||||
| sample_id=sample_id, | sample_id=sample_id, | ||||
| sample_fastq_dir=sample_fastq_dir, | |||||
| fastq1=fastq1, | |||||
| fastq2=fastq2, | |||||
| database_dir=fusioncatcher_database_dir, | database_dir=fusioncatcher_database_dir, | ||||
| docker=fusioncatcher_docker, | docker=fusioncatcher_docker, | ||||
| cluster=fusioncatcher_cluster, | cluster=fusioncatcher_cluster, |
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