@@ -12,8 +12,8 @@ task teprof_s1 { | |||
set -o pipefail | |||
set -e | |||
pigz -p 8 -dc ${fastq1} > ${sample_id}_R1.fastq | |||
pigz -p 8 -dc ${fastq2} > ${sample_id}_R2.fastq | |||
pigz -p 16 -dc ${fastq1} > ${sample_id}_R1.fastq | |||
pigz -p 16 -dc ${fastq2} > ${sample_id}_R2.fastq | |||
STAR \ | |||
--runThreadN 8 \ | |||
--genomeDir ${STAR_INDEX_DIR} \ |