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tasks/starfusion.wdl
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| @@ -31,7 +31,7 @@ task starfusion{ | |||
| cp ${sample_id}/output/FusionInspector-validate/finspector.FusionInspector.fusions.abridged.tsv ${sample_id}/output/${sample_id}_finspector.FusionInspector.fusions.abridged.tsv | |||
| cp ${sample_id}/output/FusionInspector-validate/finspector.FusionInspector.fusions.abridged.tsv.annotated ${sample_id}/output/${sample_id}_finspector.FusionInspector.fusions.abridged.tsv.annotated | |||
| cp ${sample_id}/output/FusionInspector-validate/finspector.FusionInspector.fusions.abridged.tsv.annotated.coding_effect ${sample_id}/output/${sample_id}_finspector.FusionInspector.fusions.abridged.tsv.annotated.coding_effect | |||
| cp ${sample_id}/output/FusionInspector-validate/finspector.fusion_inspector_web.html ${sample_id}/output/${sample_id}_finspector.fusion_inspector_web.html | |||
| tar -zcvf ${sample_id}/output/${sample_id}_FusionInspector-validate.tgz ${sample_id}/output/FusionInspector-validate | |||
| >>> | |||
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