charger -f ${vep_vcf} \ | charger -f ${vep_vcf} \ | ||||
-o ./output/$vep_index.charger.tsv \ | -o ./output/$vep_index.charger.tsv \ | ||||
-D ${inheritanceGeneList} \ | |||||
-D --inheritanceGeneList ${inheritanceGeneList} \ | |||||
-l --mac-clinvar-tsv ${clinvar} \ | -l --mac-clinvar-tsv ${clinvar} \ | ||||
-z ${pathogenic} \ | -z ${pathogenic} \ | ||||
-H ${HotSpot3D} \ | -H ${HotSpot3D} \ |