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@@ -2,8 +2,10 @@ import "./tasks/battenberg.wdl" as battenberg |
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workflow {{ project_name }} { |
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String sample_id |
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File tumor_bam |
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File tumor_bam_bai |
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String normal_id |
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File normal_bam |
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File normal_bam_bai |
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String battenberg_docker |
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String battenberg_cluster |
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@@ -13,8 +15,10 @@ workflow {{ project_name }} { |
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input: |
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sample_id=sample_id, |
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tumor_bam=tumor_bam, |
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tumor_bam_bai=tumor_bam_bai, |
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normal_id=normal_id, |
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normal_bam=normal_bam, |
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normal_bam_bai=normal_bam_bai, |
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docker=battenberg_docker, |
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cluster=battenberg_cluster, |
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disk_size=disk_size |