1 changed files with 2 additions and 2 deletions
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workflow.wdl
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| import "./tasks/battenberg.wdl" as battenberg | import "./tasks/battenberg.wdl" as battenberg | ||||
| workflow {{ project_name }} { | workflow {{ project_name }} { | ||||
| String tumor_id | |||||
| String sample_id | |||||
| File tumor_bam | File tumor_bam | ||||
| String normal_id | String normal_id | ||||
| File normal_bam | File normal_bam | ||||
| call battenberg.battenberg as battenberg { | call battenberg.battenberg as battenberg { | ||||
| input: | input: | ||||
| tumor_id=tumor_id, | |||||
| sample_id=sample_id, | |||||
| tumor_bam=tumor_bam, | tumor_bam=tumor_bam, | ||||
| normal_id=normal_id, | normal_id=normal_id, | ||||
| normal_bam=normal_bam, | normal_bam=normal_bam, |
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