TNBC_trim_starfusion_arriba/inputs

{
    "{{ project_name }}.sample_id": "{{ sample_id }}",
    "{{ project_name }}.fastq1": "{{ fastq1 }}",
    "{{ project_name }}.fastq2": "{{ fastq2 }}",
    "{{ project_name }}.starfusion_database_dir": "{{ starfusion_database_dir }}",
    "{{ project_name }}.starfusion_docker": "{{ starfusion_docker }}",
    "{{ project_name }}.starfusion_cluster": "{{ starfusion_cluster }}",
    "{{ project_name }}.disk_size": "{{ disk_size }}",
    "{{ project_name }}.trim_galore_docker": "{{ trim_galore_docker }}",
    "{{ project_name }}.trim_galore_cluster": "{{ trim_galore_cluster }}",
    "{{ project_name }}.STAR_INDEX_DIR": "{{ STAR_INDEX_DIR }}",
    "{{ project_name }}.ASSEMBLY_FA": "{{ ASSEMBLY_FA }}",
    "{{ project_name }}.ANNOTATION_GTF": "{{ ANNOTATION_GTF }}",
    "{{ project_name }}.arriba_docker": "{{ arriba_docker }}",
    "{{ project_name }}.arriba_cluster": "{{ arriba_cluster }}"
}