{
  "benchmarking_dir": "oss://hcc1395/reference_genome/reference_datasets_v202103/",
  "fasta": "GRCh38.d1.vd1.fa",
  "BENCHMARKdocker": "registry.cn-shanghai.aliyuncs.com/hcc1395_aliyun/rtg-hap:latest", 
  "dbsnp_dir": "oss://hcc1395/reference_genome/GRCh38.d1.vd1/",
  "BEDTOOLSdocker": "registry.cn-shanghai.aliyuncs.com/hcc1395_aliyun/bedtools:v2.27.1",
  "disk_size": "500",
  "reference_bed_dict": "oss://hcc1395/reference_genome/GRCh38.d1.vd1/GRCh38.d1.vd1.dict",
  "MULTIQCdocker": "registry.cn-shanghai.aliyuncs.com/hcc1395_aliyun/multiqc:v1.8",
  "SMALLcluster_config": "OnDemand bcs.ps.g.xlarge img-ubuntu-vpc",
  "screen_ref_dir": "oss://hcc1395/reference_genome/fastq_screen_reference/",
  "dbmills_dir": "oss://hcc1395/reference_genome/GRCh38.d1.vd1/",
  "BIGcluster_config": "OnDemand bcs.a2.7xlarge img-ubuntu-vpc",
  "fastq_screen_conf": "oss://hcc1395/reference_genome/fastq_screen_reference/fastq_screen.conf",
  "vcf_D5": "",
  "benchmark_region": "oss://hcc1395/reference_genome/reference_datasets_v202103/Quartet.high.confidence.region.v202103.bed",
  "db_mills": "Mills_and_1000G_gold_standard.indels.hg38.vcf",
  "dbsnp": "dbsnp_146.hg38.vcf",
  "MENDELIANdocker": "registry.cn-shanghai.aliyuncs.com/hcc1395_aliyun/vbt:v1.1",
  "DIYdocker": "registry.cn-shanghai.aliyuncs.com/hcc1395_aliyun/high_confidence_call_manuscript:1.5",
  "ref_dir": "oss://hcc1395/reference_genome/GRCh38.d1.vd1/"
}
